Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.67■□□□□ 0.42
HADHAP40939 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HADHAP40939 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.67■□□□□ 0.42
HADHAP40939 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.67■□□□□ 0.42
HADHAP40939 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.67■□□□□ 0.42
HADHAP40939 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HADHAP40939 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HADHAP40939 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HADHAP40939 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
HADHAP40939 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
HADHAP40939 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HADHAP40939 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
HADHAP40939 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HADHAP40939 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.66■□□□□ 0.42
HADHAP40939 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.66■□□□□ 0.42
HADHAP40939 AC080080.1-201ENST00000625121 2420 ntBASIC17.66■□□□□ 0.42
HADHAP40939 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 FAM220CP-201ENST00000395253 831 ntBASIC17.66■□□□□ 0.42
HADHAP40939 KRT17P6-201ENST00000453795 1220 ntBASIC17.66■□□□□ 0.42
HADHAP40939 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.66■□□□□ 0.42
HADHAP40939 AC122714.2-201ENST00000502787 707 ntBASIC17.66■□□□□ 0.42
HADHAP40939 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.66■□□□□ 0.42
HADHAP40939 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.66■□□□□ 0.42
HADHAP40939 MIR3180-1-201ENST00000580374 94 ntBASIC17.66■□□□□ 0.42
HADHAP40939 MIR3180-3-201ENST00000584616 94 ntBASIC17.66■□□□□ 0.42
HADHAP40939 AC092329.2-201ENST00000598402 547 ntBASIC17.66■□□□□ 0.42
HADHAP40939 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HADHAP40939 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HADHAP40939 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.66■□□□□ 0.42
HADHAP40939 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HADHAP40939 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
HADHAP40939 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HADHAP40939 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HADHAP40939 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
HADHAP40939 AC103564.2-201ENST00000432853 1299 ntBASIC17.65■□□□□ 0.42
HADHAP40939 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 MINOS1P3-201ENST00000457048 203 ntBASIC17.65■□□□□ 0.42
HADHAP40939 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HADHAP40939 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHAP40939 AC002558.1-201ENST00000488906 803 ntBASIC17.65■□□□□ 0.42
HADHAP40939 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHAP40939 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HADHAP40939 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.65■□□□□ 0.42
HADHAP40939 AC012615.1-201ENST00000565797 1299 ntBASIC17.65■□□□□ 0.42
HADHAP40939 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHAP40939 AP005901.3-202ENST00000581653 237 ntBASIC17.65■□□□□ 0.42
HADHAP40939 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms