Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HOXA13P31271 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA13P31271 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.83■□□□□ 0.76
HOXA13P31271 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
HOXA13P31271 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXA13P31271 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXA13P31271 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA13P31271 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOXA13P31271 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HOXA13P31271 PTCHD3P3-201ENST00000403073 906 ntBASIC19.82■□□□□ 0.76
HOXA13P31271 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA13P31271 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA13P31271 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXA13P31271 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXA13P31271 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.82■□□□□ 0.76
HOXA13P31271 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 PMS2P7-201ENST00000506558 1336 ntBASIC19.81■□□□□ 0.76
HOXA13P31271 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 RNF165-205ENST00000588679 2904 ntBASIC19.81■□□□□ 0.76
HOXA13P31271 BCL2-203ENST00000589955 5011 ntBASIC19.81■□□□□ 0.76
HOXA13P31271 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXA13P31271 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.81■□□□□ 0.76
HOXA13P31271 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXA13P31271 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXA13P31271 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HOXA13P31271 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXA13P31271 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXA13P31271 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXA13P31271 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXA13P31271 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
HOXA13P31271 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 AC068880.1-201ENST00000507289 2297 ntBASIC19.8■□□□□ 0.76
HOXA13P31271 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
HOXA13P31271 AC108073.2-201ENST00000464002 357 ntBASIC19.8■□□□□ 0.76
HOXA13P31271 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA13P31271 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXA13P31271 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA13P31271 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXA13P31271 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXA13P31271 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXA13P31271 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA13P31271 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HOXA13P31271 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA13P31271 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.79■□□□□ 0.76
HOXA13P31271 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA13P31271 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.79■□□□□ 0.76
HOXA13P31271 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXA13P31271 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA13P31271 KRT18P3-201ENST00000451602 1288 ntBASIC19.79■□□□□ 0.76
HOXA13P31271 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms