Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD3P28288 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ABCD3P28288 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ABCD3P28288 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 AL160237.2-201ENST00000556165 472 ntBASIC16.07■□□□□ 0.16
ABCD3P28288 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD3P28288 AL022326.1-202ENST00000641533 845 ntBASIC16.07■□□□□ 0.16
ABCD3P28288 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
ABCD3P28288 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD3P28288 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.07■□□□□ 0.16
ABCD3P28288 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ABCD3P28288 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ABCD3P28288 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 FAM197Y8-203ENST00000450145 560 ntBASIC16.06■□□□□ 0.16
ABCD3P28288 PRYP5-201ENST00000451909 266 ntBASIC16.06■□□□□ 0.16
ABCD3P28288 AP002469.2-201ENST00000531724 424 ntBASIC16.06■□□□□ 0.16
ABCD3P28288 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ABCD3P28288 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ABCD3P28288 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.06■□□□□ 0.16
ABCD3P28288 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ABCD3P28288 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ABCD3P28288 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.05■□□□□ 0.16
ABCD3P28288 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.05■□□□□ 0.16
ABCD3P28288 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.05■□□□□ 0.16
ABCD3P28288 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC073648.2-201ENST00000510116 352 ntBASIC16.05■□□□□ 0.16
ABCD3P28288 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC021087.4-201ENST00000563761 564 ntBASIC16.05■□□□□ 0.16
ABCD3P28288 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.05■□□□□ 0.16
ABCD3P28288 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 MTDHP4-201ENST00000600287 670 ntBASIC16.05■□□□□ 0.16
ABCD3P28288 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.05■□□□□ 0.16
ABCD3P28288 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ABCD3P28288 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.05■□□□□ 0.16
ABCD3P28288 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ABCD3P28288 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms