Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.04■□□□□ -0
CD40P25942 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 AC012317.2-201ENST00000623305 2251 ntBASIC15.04■□□□□ -0
CD40P25942 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CD40P25942 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.04■□□□□ -0
CD40P25942 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CD40P25942 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CD40P25942 AC046185.3-201ENST00000623228 1824 ntBASIC15.03■□□□□ -0
CD40P25942 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CD40P25942 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.03■□□□□ -0
CD40P25942 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CD40P25942 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 PMS2P7-201ENST00000506558 1336 ntBASIC15.03■□□□□ -0
CD40P25942 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.03■□□□□ -0
CD40P25942 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.03■□□□□ -0
CD40P25942 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CD40P25942 LINC00982-205ENST00000420957 435 ntBASIC15.03■□□□□ -0
CD40P25942 MED15P5-201ENST00000423150 992 ntBASIC15.03■□□□□ -0
CD40P25942 AL591424.1-201ENST00000442569 1213 ntBASIC15.03■□□□□ -0
CD40P25942 AC009947.1-201ENST00000444350 727 ntBASIC15.03■□□□□ -0
CD40P25942 AL139327.4-201ENST00000612362 153 ntBASIC15.03■□□□□ -0
CD40P25942 FAM197Y3-203ENST00000618346 717 ntBASIC15.03■□□□□ -0
CD40P25942 AC023511.2-201ENST00000618803 211 ntBASIC15.03■□□□□ -0
CD40P25942 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CD40P25942 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.03■□□□□ -0
CD40P25942 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CD40P25942 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.02■□□□□ -0
CD40P25942 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CD40P25942 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.02■□□□□ -0
CD40P25942 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.02■□□□□ -0
CD40P25942 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.02■□□□□ -0
CD40P25942 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 LINC00304-203ENST00000565008 1864 ntBASIC15.02■□□□□ -0
CD40P25942 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CD40P25942 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD40P25942 AC108751.1-201ENST00000490852 363 ntBASIC15.02■□□□□ -0
CD40P25942 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CD40P25942 AC140113.2-201ENST00000604370 208 ntBASIC15.02■□□□□ -0
CD40P25942 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.02□□□□□ -0.01
CD40P25942 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.02□□□□□ -0.01
CD40P25942 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CD40P25942 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CD40P25942 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD40P25942 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CD40P25942 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.02□□□□□ -0.01
CD40P25942 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CD40P25942 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD40P25942 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms