Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP11P24347 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP11P24347 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP11P24347 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP11P24347 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP11P24347 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP11P24347 AC141586.5-201ENST00000624546 2050 ntBASIC16.58■□□□□ 0.24
MMP11P24347 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP11P24347 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP11P24347 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP11P24347 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP11P24347 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 AC243591.1-201ENST00000452967 1364 ntBASIC16.57■□□□□ 0.24
MMP11P24347 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MMP11P24347 COX5BP2-201ENST00000392354 334 ntBASIC16.57■□□□□ 0.24
MMP11P24347 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
MMP11P24347 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP11P24347 AC103564.2-201ENST00000432853 1299 ntBASIC16.57■□□□□ 0.24
MMP11P24347 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP11P24347 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP11P24347 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.57■□□□□ 0.24
MMP11P24347 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP11P24347 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.57■□□□□ 0.24
MMP11P24347 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MMP11P24347 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP11P24347 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.57■□□□□ 0.24
MMP11P24347 AL049840.3-201ENST00000602669 611 ntBASIC16.57■□□□□ 0.24
MMP11P24347 AF228730.7-201ENST00000641842 219 ntBASIC16.57■□□□□ 0.24
MMP11P24347 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MMP11P24347 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
MMP11P24347 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
MMP11P24347 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP11P24347 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
MMP11P24347 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 AC080080.1-201ENST00000625121 2420 ntBASIC16.56■□□□□ 0.24
MMP11P24347 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
MMP11P24347 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 PMS2P1-201ENST00000431037 1228 ntBASIC16.56■□□□□ 0.24
MMP11P24347 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP11P24347 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP11P24347 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP11P24347 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 NKAPP1-205ENST00000585790 367 ntBASIC16.56■□□□□ 0.24
MMP11P24347 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.56■□□□□ 0.24
MMP11P24347 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP11P24347 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP11P24347 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP11P24347 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 PMPCAP1-201ENST00000508114 1576 ntBASIC16.55■□□□□ 0.24
MMP11P24347 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP11P24347 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MMP11P24347 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP11P24347 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms