Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
XPAP23025 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.61■□□□□ 0.41
XPAP23025 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
XPAP23025 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 SPDYE21P-201ENST00000413323 827 ntBASIC17.61■□□□□ 0.41
XPAP23025 AL031284.1-201ENST00000419297 478 ntBASIC17.61■□□□□ 0.41
XPAP23025 SIGLEC30P-201ENST00000455569 941 ntBASIC17.61■□□□□ 0.41
XPAP23025 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.61■□□□□ 0.41
XPAP23025 OR7E14P-202ENST00000530490 1290 ntBASIC17.61■□□□□ 0.41
XPAP23025 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
XPAP23025 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.61■□□□□ 0.41
XPAP23025 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
XPAP23025 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
XPAP23025 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.61■□□□□ 0.41
XPAP23025 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 RPS2P1-201ENST00000434010 821 ntBASIC17.6■□□□□ 0.41
XPAP23025 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.6■□□□□ 0.41
XPAP23025 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.6■□□□□ 0.41
XPAP23025 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.6■□□□□ 0.41
XPAP23025 LINC01451-201ENST00000623792 534 ntBASIC17.6■□□□□ 0.41
XPAP23025 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 AC132938.5-201ENST00000624980 1813 ntBASIC17.6■□□□□ 0.41
XPAP23025 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.6■□□□□ 0.41
XPAP23025 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
XPAP23025 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
XPAP23025 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
XPAP23025 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.59■□□□□ 0.41
XPAP23025 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
XPAP23025 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.59■□□□□ 0.41
XPAP23025 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms