Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD58P19256 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.74■□□□□ 0.59
CD58P19256 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.73■□□□□ 0.59
CD58P19256 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
CD58P19256 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CD58P19256 AKR1C7P-201ENST00000305623 895 ntBASIC18.73■□□□□ 0.59
CD58P19256 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CD58P19256 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.73■□□□□ 0.59
CD58P19256 STK25P1-201ENST00000585406 838 ntBASIC18.73■□□□□ 0.59
CD58P19256 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CD58P19256 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.73■□□□□ 0.59
CD58P19256 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.73■□□□□ 0.59
CD58P19256 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CD58P19256 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.73■□□□□ 0.59
CD58P19256 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD58P19256 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 PMPCAP1-201ENST00000508114 1576 ntBASIC18.72■□□□□ 0.59
CD58P19256 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 AL645608.8-201ENST00000606034 2086 ntBASIC18.72■□□□□ 0.59
CD58P19256 AC141586.5-201ENST00000624546 2050 ntBASIC18.72■□□□□ 0.59
CD58P19256 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.72■□□□□ 0.59
CD58P19256 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.72■□□□□ 0.59
CD58P19256 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 MYCLP1-201ENST00000372451 1075 ntBASIC18.72■□□□□ 0.59
CD58P19256 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 AL450487.1-201ENST00000426799 995 ntBASIC18.72■□□□□ 0.59
CD58P19256 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.72■□□□□ 0.59
CD58P19256 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.72■□□□□ 0.59
CD58P19256 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.72■□□□□ 0.59
CD58P19256 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.72■□□□□ 0.59
CD58P19256 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.72■□□□□ 0.59
CD58P19256 AP000867.4-201ENST00000641616 219 ntBASIC18.72■□□□□ 0.59
CD58P19256 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CD58P19256 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.72■□□□□ 0.59
CD58P19256 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD58P19256 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CD58P19256 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.71■□□□□ 0.59
CD58P19256 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.71■□□□□ 0.59
CD58P19256 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.71■□□□□ 0.59
CD58P19256 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.71■□□□□ 0.59
CD58P19256 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 KLF4P1-201ENST00000412782 1185 ntBASIC18.71■□□□□ 0.59
CD58P19256 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.71■□□□□ 0.59
CD58P19256 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 STK19B-204ENST00000512515 211 ntBASIC18.71■□□□□ 0.59
CD58P19256 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CD58P19256 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.71■□□□□ 0.59
CD58P19256 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.71■□□□□ 0.59
CD58P19256 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 REXO1L6P-202ENST00000619970 1078 ntBASIC18.71■□□□□ 0.59
CD58P19256 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms