Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 AC078925.2-201ENST00000624013 1973 ntBASIC14.51□□□□□ -0.09
CTSDP07339 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 AC092053.1-201ENST00000605787 1936 ntBASIC14.51□□□□□ -0.09
CTSDP07339 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.51□□□□□ -0.09
CTSDP07339 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.51□□□□□ -0.09
CTSDP07339 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.51□□□□□ -0.09
CTSDP07339 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.51□□□□□ -0.09
CTSDP07339 AC026471.5-201ENST00000615068 467 ntBASIC14.51□□□□□ -0.09
CTSDP07339 AL049637.2-201ENST00000641778 930 ntBASIC14.51□□□□□ -0.09
CTSDP07339 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.51□□□□□ -0.09
CTSDP07339 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 AC006449.5-201ENST00000610658 2098 ntBASIC14.51□□□□□ -0.09
CTSDP07339 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CTSDP07339 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CTSDP07339 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.51□□□□□ -0.09
CTSDP07339 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTSDP07339 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CTSDP07339 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.5□□□□□ -0.09
CTSDP07339 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 CYP2T1P-202ENST00000641596 2535 ntBASIC14.5□□□□□ -0.09
CTSDP07339 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 UNC93B2-201ENST00000285383 730 ntBASIC14.5□□□□□ -0.09
CTSDP07339 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 AC009947.2-201ENST00000444014 672 ntBASIC14.5□□□□□ -0.09
CTSDP07339 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.5□□□□□ -0.09
CTSDP07339 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.5□□□□□ -0.09
CTSDP07339 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.5□□□□□ -0.09
CTSDP07339 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CTSDP07339 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.5□□□□□ -0.09
CTSDP07339 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CTSDP07339 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 RNF216P1-203ENST00000404404 2427 ntBASIC14.5□□□□□ -0.09
CTSDP07339 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTSDP07339 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
CTSDP07339 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.49□□□□□ -0.09
CTSDP07339 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms