Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HLA-DOAP06340 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.49■□□□□ 0.87
HLA-DOAP06340 AC004967.1-201ENST00000453589 447 ntBASIC20.49■□□□□ 0.87
HLA-DOAP06340 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.49■□□□□ 0.87
HLA-DOAP06340 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.49■□□□□ 0.87
HLA-DOAP06340 AC092865.6-201ENST00000642101 219 ntBASIC20.49■□□□□ 0.87
HLA-DOAP06340 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 LINC00304-203ENST00000565008 1864 ntBASIC20.49■□□□□ 0.87
HLA-DOAP06340 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HLA-DOAP06340 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 SLC25A6P5-201ENST00000435663 894 ntBASIC20.48■□□□□ 0.87
HLA-DOAP06340 AC096734.2-201ENST00000562054 433 ntBASIC20.48■□□□□ 0.87
HLA-DOAP06340 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 AC010507.1-201ENST00000633895 436 ntBASIC20.48■□□□□ 0.87
HLA-DOAP06340 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HLA-DOAP06340 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
HLA-DOAP06340 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 AC006116.8-202ENST00000587620 1550 ntBASIC20.47■□□□□ 0.87
HLA-DOAP06340 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 RPS8P6-201ENST00000426177 609 ntBASIC20.47■□□□□ 0.87
HLA-DOAP06340 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 OR7E47P-204ENST00000575924 449 ntBASIC20.47■□□□□ 0.87
HLA-DOAP06340 AL513190.1-201ENST00000621254 727 ntBASIC20.47■□□□□ 0.87
HLA-DOAP06340 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HLA-DOAP06340 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.47■□□□□ 0.87
HLA-DOAP06340 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 AC005829.1-201ENST00000570002 483 ntBASIC20.46■□□□□ 0.87
HLA-DOAP06340 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 AC134684.3-201ENST00000641758 218 ntBASIC20.46■□□□□ 0.87
HLA-DOAP06340 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DOAP06340 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DOAP06340 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DOAP06340 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DOAP06340 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DOAP06340 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HLA-DOAP06340 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms