Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.5■□□□□ 0.23
MT-ND1P03886 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.5■□□□□ 0.23
MT-ND1P03886 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MT-ND1P03886 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 AL603756.1-201ENST00000606511 2163 ntBASIC16.5■□□□□ 0.23
MT-ND1P03886 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 AC046185.3-201ENST00000623228 1824 ntBASIC16.49■□□□□ 0.23
MT-ND1P03886 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MT-ND1P03886 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MT-ND1P03886 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MT-ND1P03886 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-ND1P03886 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 HMGA1P5-201ENST00000412453 271 ntBASIC16.49■□□□□ 0.23
MT-ND1P03886 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
MT-ND1P03886 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 NEK4P2-201ENST00000580004 1012 ntBASIC16.49■□□□□ 0.23
MT-ND1P03886 AC024243.1-201ENST00000609234 778 ntBASIC16.49■□□□□ 0.23
MT-ND1P03886 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MT-ND1P03886 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
MT-ND1P03886 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 AC116353.5-201ENST00000638148 1699 ntBASIC16.49■□□□□ 0.23
MT-ND1P03886 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
MT-ND1P03886 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-ND1P03886 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 PCDHA1-201ENST00000378133 2726 ntBASIC16.48■□□□□ 0.23
MT-ND1P03886 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-ND1P03886 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MT-ND1P03886 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.48■□□□□ 0.23
MT-ND1P03886 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.48■□□□□ 0.23
MT-ND1P03886 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-ND1P03886 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms