Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LTAP01374 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LTAP01374 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LTAP01374 KRT89P-201ENST00000620027 1478 ntBASIC13.16□□□□□ -0.3
LTAP01374 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LTAP01374 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LTAP01374 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
LTAP01374 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.16□□□□□ -0.3
LTAP01374 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
LTAP01374 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LTAP01374 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
LTAP01374 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LTAP01374 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.15□□□□□ -0.3
LTAP01374 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 AC002558.1-201ENST00000488906 803 ntBASIC13.15□□□□□ -0.3
LTAP01374 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.15□□□□□ -0.3
LTAP01374 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.15□□□□□ -0.3
LTAP01374 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.15□□□□□ -0.3
LTAP01374 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 AP001412.1-201ENST00000608405 714 ntBASIC13.15□□□□□ -0.3
LTAP01374 AL359736.2-201ENST00000621992 437 ntBASIC13.15□□□□□ -0.3
LTAP01374 AC010653.2-201ENST00000623505 997 ntBASIC13.15□□□□□ -0.3
LTAP01374 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LTAP01374 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.15□□□□□ -0.3
LTAP01374 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.15□□□□□ -0.31
LTAP01374 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.15□□□□□ -0.31
LTAP01374 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
LTAP01374 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.15□□□□□ -0.31
LTAP01374 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.15□□□□□ -0.31
LTAP01374 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.14□□□□□ -0.31
LTAP01374 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LTAP01374 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 ABHD17AP1-201ENST00000358206 933 ntBASIC13.14□□□□□ -0.31
LTAP01374 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.14□□□□□ -0.31
LTAP01374 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.14□□□□□ -0.31
LTAP01374 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.14□□□□□ -0.31
LTAP01374 AC009154.2-201ENST00000621177 724 ntBASIC13.14□□□□□ -0.31
LTAP01374 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 AL513477.1-201ENST00000602865 2407 ntBASIC13.14□□□□□ -0.31
LTAP01374 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LTAP01374 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LTAP01374 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
LTAP01374 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
LTAP01374 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms