Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ABCA1O95477 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ABCA1O95477 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC006504.4-201ENST00000592118 1568 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 YBX1P5-201ENST00000509441 847 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 SNHG9-202ENST00000564014 471 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCA1O95477 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC073592.4-201ENST00000623827 446 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC007967.3-201ENST00000434308 558 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 MKNK2P1-201ENST00000437526 628 ntBASIC14.62□□□□□ -0.07
ABCA1O95477 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ABCA1O95477 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCA1O95477 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCA1O95477 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ABCA1O95477 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ABCA1O95477 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 TSEN15P1-201ENST00000423257 515 ntBASIC14.61□□□□□ -0.07
ABCA1O95477 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.61□□□□□ -0.07
ABCA1O95477 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.61□□□□□ -0.07
ABCA1O95477 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCA1O95477 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCA1O95477 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
ABCA1O95477 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCA1O95477 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.61□□□□□ -0.07
ABCA1O95477 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.61□□□□□ -0.07
ABCA1O95477 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.61□□□□□ -0.07
ABCA1O95477 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.61□□□□□ -0.07
ABCA1O95477 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCA1O95477 MIR4469-201ENST00000583919 79 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms