Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.64□□□□□ -0.07
SIX6O95475 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 AL445675.2-201ENST00000620291 557 ntBASIC14.64□□□□□ -0.07
SIX6O95475 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.64□□□□□ -0.07
SIX6O95475 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.64□□□□□ -0.07
SIX6O95475 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SIX6O95475 AC022898.2-201ENST00000616822 1312 ntBASIC14.64□□□□□ -0.07
SIX6O95475 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SIX6O95475 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
SIX6O95475 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SIX6O95475 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.63□□□□□ -0.07
SIX6O95475 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 MIR638-201ENST00000385237 100 ntBASIC14.63□□□□□ -0.07
SIX6O95475 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 AC004951.3-201ENST00000418645 1148 ntBASIC14.63□□□□□ -0.07
SIX6O95475 POM121L13P-201ENST00000422362 380 ntBASIC14.63□□□□□ -0.07
SIX6O95475 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.63□□□□□ -0.07
SIX6O95475 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.63□□□□□ -0.07
SIX6O95475 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.63□□□□□ -0.07
SIX6O95475 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.63□□□□□ -0.07
SIX6O95475 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.63□□□□□ -0.07
SIX6O95475 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SIX6O95475 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.63□□□□□ -0.07
SIX6O95475 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SIX6O95475 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SIX6O95475 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SIX6O95475 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SIX6O95475 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.62□□□□□ -0.07
SIX6O95475 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.62□□□□□ -0.07
SIX6O95475 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.62□□□□□ -0.07
SIX6O95475 AC087623.3-201ENST00000607047 1098 ntBASIC14.62□□□□□ -0.07
SIX6O95475 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms