Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLSTN1O94985 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.35■□□□□ 0.69
CLSTN1O94985 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CLSTN1O94985 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLSTN1O94985 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.35■□□□□ 0.69
CLSTN1O94985 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.35■□□□□ 0.69
CLSTN1O94985 LINC00265-3P-201ENST00000447588 903 ntBASIC19.35■□□□□ 0.69
CLSTN1O94985 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CLSTN1O94985 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLSTN1O94985 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.35■□□□□ 0.69
CLSTN1O94985 AC011840.4-201ENST00000578471 627 ntBASIC19.35■□□□□ 0.69
CLSTN1O94985 AC092119.3-201ENST00000612618 583 ntBASIC19.35■□□□□ 0.69
CLSTN1O94985 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.35■□□□□ 0.69
CLSTN1O94985 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.35■□□□□ 0.69
CLSTN1O94985 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLSTN1O94985 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLSTN1O94985 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLSTN1O94985 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.34■□□□□ 0.69
CLSTN1O94985 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 AC100803.2-201ENST00000562459 1963 ntBASIC19.34■□□□□ 0.69
CLSTN1O94985 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CLSTN1O94985 AP002414.4-201ENST00000589764 1148 ntBASIC19.34■□□□□ 0.69
CLSTN1O94985 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.34■□□□□ 0.69
CLSTN1O94985 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLSTN1O94985 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.34■□□□□ 0.69
CLSTN1O94985 C8orf49-201ENST00000525043 1968 ntBASIC19.33■□□□□ 0.69
CLSTN1O94985 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLSTN1O94985 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLSTN1O94985 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CLSTN1O94985 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.33■□□□□ 0.68
CLSTN1O94985 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.33■□□□□ 0.68
CLSTN1O94985 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.33■□□□□ 0.68
CLSTN1O94985 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.33■□□□□ 0.68
CLSTN1O94985 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.33■□□□□ 0.68
CLSTN1O94985 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.33■□□□□ 0.68
CLSTN1O94985 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CLSTN1O94985 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLSTN1O94985 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.33■□□□□ 0.68
CLSTN1O94985 AL645608.8-201ENST00000606034 2086 ntBASIC19.32■□□□□ 0.68
CLSTN1O94985 AC016734.2-201ENST00000624325 1377 ntBASIC19.32■□□□□ 0.68
CLSTN1O94985 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.32■□□□□ 0.68
CLSTN1O94985 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLSTN1O94985 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CLSTN1O94985 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.32■□□□□ 0.68
CLSTN1O94985 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLSTN1O94985 AP000867.3-201ENST00000524675 377 ntBASIC19.32■□□□□ 0.68
CLSTN1O94985 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.32■□□□□ 0.68
CLSTN1O94985 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.32■□□□□ 0.68
CLSTN1O94985 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.32■□□□□ 0.68
CLSTN1O94985 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.32■□□□□ 0.68
CLSTN1O94985 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.32■□□□□ 0.68
CLSTN1O94985 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.32■□□□□ 0.68
CLSTN1O94985 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms