Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFS3O75489 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.42■□□□□ 0.38
NDUFS3O75489 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFS3O75489 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NDUFS3O75489 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.41■□□□□ 0.38
NDUFS3O75489 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.41■□□□□ 0.38
NDUFS3O75489 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 AC104819.1-201ENST00000504587 486 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.41■□□□□ 0.38
NDUFS3O75489 MIR3180-1-201ENST00000580374 94 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 MIR3180-3-201ENST00000584616 94 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.41■□□□□ 0.38
NDUFS3O75489 AC092329.2-201ENST00000598402 547 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 AC092119.3-201ENST00000612618 583 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 NPAP1P7-201ENST00000613027 823 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 AC093458.2-201ENST00000623150 629 ntBASIC17.41■□□□□ 0.38
NDUFS3O75489 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.41■□□□□ 0.38
NDUFS3O75489 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NDUFS3O75489 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.41■□□□□ 0.38
NDUFS3O75489 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NDUFS3O75489 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFS3O75489 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 AL049757.1-201ENST00000616842 1596 ntBASIC17.4■□□□□ 0.38
NDUFS3O75489 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS3O75489 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS3O75489 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDUFS3O75489 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS3O75489 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS3O75489 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.4■□□□□ 0.38
NDUFS3O75489 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NDUFS3O75489 AC096582.2-201ENST00000510860 516 ntBASIC17.4■□□□□ 0.38
NDUFS3O75489 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDUFS3O75489 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS3O75489 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS3O75489 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.4■□□□□ 0.38
NDUFS3O75489 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
NDUFS3O75489 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.39■□□□□ 0.38
NDUFS3O75489 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.39■□□□□ 0.38
NDUFS3O75489 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.39■□□□□ 0.38
NDUFS3O75489 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
NDUFS3O75489 KRT8P10-201ENST00000450021 1447 ntBASIC17.39■□□□□ 0.38
NDUFS3O75489 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NDUFS3O75489 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 AC020916.1-201ENST00000587762 1774 ntBASIC17.39■□□□□ 0.37
NDUFS3O75489 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS3O75489 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NDUFS3O75489 IGHV3-47-201ENST00000425060 335 ntBASIC17.39■□□□□ 0.37
NDUFS3O75489 ATP5G2P1-201ENST00000433580 426 ntBASIC17.39■□□□□ 0.37
NDUFS3O75489 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.39■□□□□ 0.37
NDUFS3O75489 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.39■□□□□ 0.37
NDUFS3O75489 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS3O75489 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.39■□□□□ 0.37
NDUFS3O75489 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NDUFS3O75489 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NDUFS3O75489 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms