Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC099398.1-201ENST00000567919 2776 ntBASIC17.52■□□□□ 0.4
GPC4O75487 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
GPC4O75487 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GPC4O75487 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GPC4O75487 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
GPC4O75487 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.52■□□□□ 0.39
GPC4O75487 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GPC4O75487 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GPC4O75487 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
GPC4O75487 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.52■□□□□ 0.39
GPC4O75487 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GPC4O75487 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GPC4O75487 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 AC246785.2-201ENST00000432512 513 ntBASIC17.51■□□□□ 0.39
GPC4O75487 DRAXINP1-201ENST00000437611 948 ntBASIC17.51■□□□□ 0.39
GPC4O75487 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
GPC4O75487 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
GPC4O75487 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.51■□□□□ 0.39
GPC4O75487 AC069148.1-201ENST00000608741 768 ntBASIC17.51■□□□□ 0.39
GPC4O75487 AC116407.2-201ENST00000613639 860 ntBASIC17.51■□□□□ 0.39
GPC4O75487 AD000864.1-201ENST00000624076 2295 ntBASIC17.51■□□□□ 0.39
GPC4O75487 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GPC4O75487 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GPC4O75487 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC4O75487 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GPC4O75487 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC4O75487 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC4O75487 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GPC4O75487 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC4O75487 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GPC4O75487 AC096633.1-201ENST00000422446 749 ntBASIC17.5■□□□□ 0.39
GPC4O75487 ATP5G2P1-201ENST00000433580 426 ntBASIC17.5■□□□□ 0.39
GPC4O75487 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.5■□□□□ 0.39
GPC4O75487 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 TPSP2-201ENST00000561760 610 ntBASIC17.5■□□□□ 0.39
GPC4O75487 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC4O75487 AP002414.4-201ENST00000589764 1148 ntBASIC17.5■□□□□ 0.39
GPC4O75487 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 AL355312.1-201ENST00000407115 2176 ntBASIC17.5■□□□□ 0.39
GPC4O75487 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.5■□□□□ 0.39
GPC4O75487 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
GPC4O75487 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
GPC4O75487 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GPC4O75487 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC4O75487 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 KRT18P1-202ENST00000452408 1331 ntBASIC17.49■□□□□ 0.39
GPC4O75487 AC097374.2-201ENST00000618617 1306 ntBASIC17.49■□□□□ 0.39
GPC4O75487 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 AC009949.1-201ENST00000623048 1830 ntBASIC17.49■□□□□ 0.39
GPC4O75487 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GPC4O75487 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GPC4O75487 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC4O75487 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC4O75487 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms