Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SUPT3HO75486 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.35■□□□□ 0.37
SUPT3HO75486 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.35■□□□□ 0.37
SUPT3HO75486 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SUPT3HO75486 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SUPT3HO75486 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SUPT3HO75486 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.34■□□□□ 0.37
SUPT3HO75486 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT3HO75486 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT3HO75486 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT3HO75486 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.34■□□□□ 0.37
SUPT3HO75486 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 AC068472.1-201ENST00000474589 881 ntBASIC17.34■□□□□ 0.37
SUPT3HO75486 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 RNF126P1-202ENST00000569893 925 ntBASIC17.34■□□□□ 0.37
SUPT3HO75486 AP001094.4-201ENST00000579008 2176 ntBASIC17.34■□□□□ 0.37
SUPT3HO75486 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.34■□□□□ 0.37
SUPT3HO75486 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SUPT3HO75486 HYMAI.1-201ENST00000620949 238 ntBASIC17.34■□□□□ 0.37
SUPT3HO75486 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.34■□□□□ 0.37
SUPT3HO75486 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.34■□□□□ 0.37
SUPT3HO75486 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SUPT3HO75486 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SUPT3HO75486 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
SUPT3HO75486 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.33■□□□□ 0.37
SUPT3HO75486 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SUPT3HO75486 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
SUPT3HO75486 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SUPT3HO75486 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT3HO75486 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT3HO75486 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.33■□□□□ 0.36
SUPT3HO75486 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.33■□□□□ 0.36
SUPT3HO75486 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SUPT3HO75486 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SUPT3HO75486 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SUPT3HO75486 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.32■□□□□ 0.36
SUPT3HO75486 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SUPT3HO75486 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SUPT3HO75486 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms