Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CACNA1FO60840 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CACNA1FO60840 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.74■■□□□ 1.07
CACNA1FO60840 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CACNA1FO60840 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA1FO60840 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CACNA1FO60840 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CACNA1FO60840 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA1FO60840 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.74■■□□□ 1.07
CACNA1FO60840 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CACNA1FO60840 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA1FO60840 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CACNA1FO60840 KRT18P3-201ENST00000451602 1288 ntBASIC21.74■■□□□ 1.07
CACNA1FO60840 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
CACNA1FO60840 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA1FO60840 AL021920.2-201ENST00000624828 1351 ntBASIC21.74■■□□□ 1.07
CACNA1FO60840 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA1FO60840 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA1FO60840 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.73■■□□□ 1.07
CACNA1FO60840 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA1FO60840 AC002347.1-201ENST00000569543 541 ntBASIC21.73■■□□□ 1.07
CACNA1FO60840 MIR3909-201ENST00000579518 119 ntBASIC21.73■■□□□ 1.07
CACNA1FO60840 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA1FO60840 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA1FO60840 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CACNA1FO60840 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CACNA1FO60840 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.72■■□□□ 1.07
CACNA1FO60840 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 AC064836.3-201ENST00000607928 673 ntBASIC21.72■■□□□ 1.07
CACNA1FO60840 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CACNA1FO60840 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.72■■□□□ 1.07
CACNA1FO60840 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CACNA1FO60840 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.72■■□□□ 1.07
CACNA1FO60840 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
CACNA1FO60840 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.72■■□□□ 1.07
CACNA1FO60840 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.72■■□□□ 1.07
CACNA1FO60840 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA1FO60840 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.71■■□□□ 1.07
CACNA1FO60840 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CACNA1FO60840 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CACNA1FO60840 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CACNA1FO60840 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.71■■□□□ 1.07
CACNA1FO60840 ALG1L5P-201ENST00000482043 771 ntBASIC21.71■■□□□ 1.07
CACNA1FO60840 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 PDPK2P-202ENST00000562415 1191 ntBASIC21.71■■□□□ 1.07
CACNA1FO60840 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CACNA1FO60840 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.71■■□□□ 1.07
CACNA1FO60840 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 LINC02012-201ENST00000608206 1725 ntBASIC21.71■■□□□ 1.07
CACNA1FO60840 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.71■■□□□ 1.07
CACNA1FO60840 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CACNA1FO60840 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms