Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA12O60330 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA12O60330 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHGA12O60330 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 AC139713.2-201ENST00000641328 2723 ntBASIC17.3■□□□□ 0.36
PCDHGA12O60330 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA12O60330 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AC002310.6-201ENST00000624451 1377 ntBASIC17.29■□□□□ 0.36
PCDHGA12O60330 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AC005829.1-201ENST00000570002 483 ntBASIC17.29■□□□□ 0.36
PCDHGA12O60330 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 ESPNP-201ENST00000270691 2015 ntBASIC17.29■□□□□ 0.36
PCDHGA12O60330 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGA12O60330 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGA12O60330 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 YBX1P5-201ENST00000509441 847 ntBASIC17.28■□□□□ 0.36
PCDHGA12O60330 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 AC004817.3-201ENST00000602957 2129 ntBASIC17.28■□□□□ 0.36
PCDHGA12O60330 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGA12O60330 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGA12O60330 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms