Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMAD6O43541 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SMAD6O43541 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD6O43541 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMAD6O43541 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 AC034105.1-201ENST00000563488 319 ntBASIC17.59■□□□□ 0.41
SMAD6O43541 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.59■□□□□ 0.41
SMAD6O43541 MIR1199-201ENST00000621445 119 ntBASIC17.59■□□□□ 0.41
SMAD6O43541 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.59■□□□□ 0.41
SMAD6O43541 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMAD6O43541 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMAD6O43541 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.59■□□□□ 0.41
SMAD6O43541 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD6O43541 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD6O43541 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SMAD6O43541 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMAD6O43541 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SMAD6O43541 ACTG1P4-201ENST00000425123 1122 ntBASIC17.58■□□□□ 0.4
SMAD6O43541 AC009947.1-201ENST00000444350 727 ntBASIC17.58■□□□□ 0.4
SMAD6O43541 Z83851.2-201ENST00000609564 659 ntBASIC17.58■□□□□ 0.4
SMAD6O43541 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.58■□□□□ 0.4
SMAD6O43541 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMAD6O43541 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.58■□□□□ 0.4
SMAD6O43541 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SMAD6O43541 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.57■□□□□ 0.4
SMAD6O43541 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 AC005593.1-201ENST00000624894 515 ntBASIC17.57■□□□□ 0.4
SMAD6O43541 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.57■□□□□ 0.4
SMAD6O43541 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.57■□□□□ 0.4
SMAD6O43541 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMAD6O43541 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.56■□□□□ 0.4
SMAD6O43541 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.56■□□□□ 0.4
SMAD6O43541 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 PTCHD3P3-201ENST00000403073 906 ntBASIC17.56■□□□□ 0.4
SMAD6O43541 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMAD6O43541 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.56■□□□□ 0.4
SMAD6O43541 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.56■□□□□ 0.4
SMAD6O43541 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms