Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NDUFS4O43181 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 AC132938.5-201ENST00000624980 1813 ntBASIC16.72■□□□□ 0.27
NDUFS4O43181 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS4O43181 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.72■□□□□ 0.27
NDUFS4O43181 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.72■□□□□ 0.27
NDUFS4O43181 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 PMPCAP1-201ENST00000508114 1576 ntBASIC16.72■□□□□ 0.27
NDUFS4O43181 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDUFS4O43181 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.71■□□□□ 0.27
NDUFS4O43181 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 AL450487.1-201ENST00000426799 995 ntBASIC16.71■□□□□ 0.27
NDUFS4O43181 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 STK19B-204ENST00000512515 211 ntBASIC16.71■□□□□ 0.27
NDUFS4O43181 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
NDUFS4O43181 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.71■□□□□ 0.27
NDUFS4O43181 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.71■□□□□ 0.27
NDUFS4O43181 STK25P1-201ENST00000585406 838 ntBASIC16.71■□□□□ 0.27
NDUFS4O43181 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 REXO1L6P-202ENST00000619970 1078 ntBASIC16.71■□□□□ 0.27
NDUFS4O43181 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 AP000867.4-201ENST00000641616 219 ntBASIC16.71■□□□□ 0.27
NDUFS4O43181 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.71■□□□□ 0.27
NDUFS4O43181 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
NDUFS4O43181 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDUFS4O43181 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFS4O43181 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDUFS4O43181 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
NDUFS4O43181 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NDUFS4O43181 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NDUFS4O43181 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 AL645608.8-201ENST00000606034 2086 ntBASIC16.7■□□□□ 0.26
NDUFS4O43181 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.7■□□□□ 0.26
NDUFS4O43181 SAPCD2P3-201ENST00000455031 850 ntBASIC16.7■□□□□ 0.26
NDUFS4O43181 UNC93B7-201ENST00000509439 705 ntBASIC16.7■□□□□ 0.26
NDUFS4O43181 AC106795.1-205ENST00000512851 1056 ntBASIC16.7■□□□□ 0.26
NDUFS4O43181 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.7■□□□□ 0.26
NDUFS4O43181 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.7■□□□□ 0.26
NDUFS4O43181 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.7■□□□□ 0.26
NDUFS4O43181 AP005117.1-201ENST00000584346 1413 ntBASIC16.7■□□□□ 0.26
NDUFS4O43181 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDUFS4O43181 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFS4O43181 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NDUFS4O43181 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFS4O43181 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDUFS4O43181 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
NDUFS4O43181 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms