Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PCDHA1-201ENST00000378133 2726 ntBASIC16.61■□□□□ 0.25
CLOCKO15516 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.61■□□□□ 0.25
CLOCKO15516 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.61■□□□□ 0.25
CLOCKO15516 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.61■□□□□ 0.25
CLOCKO15516 AC104076.2-201ENST00000448912 469 ntBASIC16.61■□□□□ 0.25
CLOCKO15516 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.61■□□□□ 0.25
CLOCKO15516 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.61■□□□□ 0.25
CLOCKO15516 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLOCKO15516 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLOCKO15516 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLOCKO15516 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.61■□□□□ 0.25
CLOCKO15516 AC060834.1-201ENST00000443027 2032 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.6■□□□□ 0.25
CLOCKO15516 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 LINC02199-201ENST00000506655 2702 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.6■□□□□ 0.25
CLOCKO15516 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 TSPY17P-201ENST00000450329 467 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.6■□□□□ 0.25
CLOCKO15516 AC087388.1-201ENST00000571370 1112 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 MIR3180-4-201ENST00000582223 153 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 AC116407.2-201ENST00000613639 860 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 AL023803.3-201ENST00000615559 522 ntBASIC16.6■□□□□ 0.25
CLOCKO15516 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.6■□□□□ 0.25
CLOCKO15516 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLOCKO15516 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLOCKO15516 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.6■□□□□ 0.25
CLOCKO15516 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLOCKO15516 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
CLOCKO15516 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLOCKO15516 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 AP003041.3-201ENST00000527151 707 ntBASIC16.59■□□□□ 0.25
CLOCKO15516 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
CLOCKO15516 AL353719.1-201ENST00000566847 864 ntBASIC16.59■□□□□ 0.25
CLOCKO15516 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.59■□□□□ 0.25
CLOCKO15516 NTF6B-201ENST00000591913 560 ntBASIC16.59■□□□□ 0.25
CLOCKO15516 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.59■□□□□ 0.25
CLOCKO15516 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.59■□□□□ 0.25
CLOCKO15516 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLOCKO15516 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms