Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
NPIPA2E9PIF3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 NOC2LP2-201ENST00000407594 1944 ntBASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 BX005266.1-201ENST00000473402 457 ntBASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 POLD2P1-201ENST00000511220 997 ntBASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 AC117500.6-201ENST00000624871 588 ntBASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPIPA2E9PIF3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 AC122714.2-201ENST00000502787 707 ntBASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 TERC-201ENST00000602385 541 ntBASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPIPA2E9PIF3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 AC012640.2-201ENST00000561606 901 ntBASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 AC006538.3-201ENST00000612495 578 ntBASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.9■□□□□ 0.14
NPIPA2E9PIF3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms