Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC080080.1-201ENST00000625121 2420 ntBASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 OR6D1P-203ENST00000641209 4860 ntBASIC21.37■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 RCN1P2-201ENST00000398357 915 ntBASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC111152.3-201ENST00000569699 673 ntBASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 MYCLP1-201ENST00000372451 1075 ntBASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM6-TRIM34B2RNG4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.33■■□□□ 1.01
TRIM6-TRIM34B2RNG4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms