Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AC046185.3-201ENST00000623228 1824 ntBASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 SIGLEC16-201ENST00000599858 1437 ntBASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGC4Q9Y5F7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 FAM197Y8-203ENST00000450145 560 ntBASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SCARNA2-201ENST00000458748 420 ntBASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 AL139288.1-201ENST00000623748 933 ntBASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGC4Q9Y5F7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 SIGLEC30P-201ENST00000455569 941 ntBASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 AL160237.2-201ENST00000556165 472 ntBASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 AC021087.4-201ENST00000563761 564 ntBASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGC4Q9Y5F7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms