Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHTOPQ9Y3Y2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.58□□□□□ -0.39
CHTOPQ9Y3Y2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 AL139246.5-201ENST00000606645 996 ntBASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 HLA-J-201ENST00000462773 1622 ntBASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHTOPQ9Y3Y2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.57□□□□□ -0.4
CHTOPQ9Y3Y2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms