Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 AC138761.1-201ENST00000584393 385 ntBASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 AC116407.2-201ENST00000613639 860 ntBASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS5Q9UPZ3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AL138831.2-201ENST00000606564 490 ntBASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS5Q9UPZ3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPS5Q9UPZ3 AC125634.1-201ENST00000438758 1403 ntBASIC20.77■□□□□ 0.91
HPS5Q9UPZ3 AC020763.4-201ENST00000623414 4170 ntBASIC20.77■□□□□ 0.91
HPS5Q9UPZ3 AC097374.2-201ENST00000618617 1306 ntBASIC20.77■□□□□ 0.91
HPS5Q9UPZ3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 AL035252.4-201ENST00000624174 288 ntBASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 AC107918.4-202ENST00000641623 219 ntBASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS5Q9UPZ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 AC133963.1-201ENST00000504166 1679 ntBASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 ABCD1P5-201ENST00000445663 754 ntBASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.75■□□□□ 0.91
HPS5Q9UPZ3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.74■□□□□ 0.91
HPS5Q9UPZ3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS5Q9UPZ3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS5Q9UPZ3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.74■□□□□ 0.91
HPS5Q9UPZ3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS5Q9UPZ3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms