Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 LTB4R2-202ENST00000528054 3092 ntBASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHGC3Q9UN70 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.39■□□□□ 0.54
PCDHGC3Q9UN70 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 ACTG1P4-201ENST00000425123 1122 ntBASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 LINC02012-201ENST00000608206 1725 ntBASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHGC3Q9UN70 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 AL355877.3-201ENST00000622820 899 ntBASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGC3Q9UN70 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 AKR1C7P-201ENST00000305623 895 ntBASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 AL139288.1-201ENST00000623748 933 ntBASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGC3Q9UN70 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms