Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP25Q9UHP3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 AC117947.1-201ENST00000427448 529 ntBASIC20.04■□□□□ 0.8
USP25Q9UHP3 HOMER2P1-201ENST00000455653 964 ntBASIC20.04■□□□□ 0.8
USP25Q9UHP3 AC112698.1-201ENST00000510299 916 ntBASIC20.04■□□□□ 0.8
USP25Q9UHP3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.04■□□□□ 0.8
USP25Q9UHP3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP25Q9UHP3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.03■□□□□ 0.8
USP25Q9UHP3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP25Q9UHP3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 REXO1L11P-201ENST00000620964 1927 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 RNF152P1-201ENST00000397754 604 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 TSPY5P-201ENST00000426936 936 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 AC092597.1-201ENST00000487352 616 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 AP003733.1-201ENST00000491725 852 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 ZNF444P1-201ENST00000559497 298 ntBASIC20.02■□□□□ 0.8
USP25Q9UHP3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP25Q9UHP3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.02■□□□□ 0.8
USP25Q9UHP3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP25Q9UHP3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.02■□□□□ 0.79
USP25Q9UHP3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP25Q9UHP3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP25Q9UHP3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms