Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 AC009947.1-201ENST00000444350 727 ntBASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 AC027601.4-201ENST00000611259 610 ntBASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 FAM197Y3-203ENST00000618346 717 ntBASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 LINC01451-201ENST00000623792 534 ntBASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCF1Q9UBD9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 AC006116.8-202ENST00000587620 1550 ntBASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLCF1Q9UBD9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 AC097637.2-201ENST00000624096 1997 ntBASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 MED15P5-201ENST00000423150 992 ntBASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 AL591424.1-201ENST00000442569 1213 ntBASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 TERC-201ENST00000602385 541 ntBASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 AC140113.2-201ENST00000604370 208 ntBASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLCF1Q9UBD9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 PMS2P7-201ENST00000506558 1336 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 LINC00982-205ENST00000420957 435 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 AC108751.1-201ENST00000490852 363 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 AL353135.1-201ENST00000606729 504 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 AC026471.1-201ENST00000564629 3026 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 LINC00304-203ENST00000565008 1864 ntBASIC15.5■□□□□ 0.07
CLCF1Q9UBD9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms