Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 PAWRP1-201ENST00000451083 565 ntBASIC19.65■□□□□ 0.74
COL20A1Q9P218 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 GGTLC5P-201ENST00000617623 998 ntBASIC19.65■□□□□ 0.74
COL20A1Q9P218 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.65■□□□□ 0.74
COL20A1Q9P218 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL20A1Q9P218 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL20A1Q9P218 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL20A1Q9P218 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
COL20A1Q9P218 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 MCCD1P2-201ENST00000423228 335 ntBASIC19.64■□□□□ 0.73
COL20A1Q9P218 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 ALG1L5P-201ENST00000482043 771 ntBASIC19.64■□□□□ 0.73
COL20A1Q9P218 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL20A1Q9P218 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL20A1Q9P218 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AC002310.6-201ENST00000624451 1377 ntBASIC19.63■□□□□ 0.73
COL20A1Q9P218 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 DNAJB3-201ENST00000446806 729 ntBASIC19.63■□□□□ 0.73
COL20A1Q9P218 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AL691403.2-201ENST00000618460 490 ntBASIC19.63■□□□□ 0.73
COL20A1Q9P218 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.63■□□□□ 0.73
COL20A1Q9P218 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 AC134043.2-201ENST00000624206 2238 ntBASIC19.63■□□□□ 0.73
COL20A1Q9P218 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL20A1Q9P218 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL20A1Q9P218 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 RHOQP3-201ENST00000437982 621 ntBASIC19.62■□□□□ 0.73
COL20A1Q9P218 SLC25A6P2-201ENST00000497974 877 ntBASIC19.62■□□□□ 0.73
COL20A1Q9P218 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 AC096734.2-201ENST00000562054 433 ntBASIC19.62■□□□□ 0.73
COL20A1Q9P218 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 MTDHP5-201ENST00000598980 586 ntBASIC19.62■□□□□ 0.73
COL20A1Q9P218 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.62■□□□□ 0.73
COL20A1Q9P218 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms