Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 DDX43P3-201ENST00000441064 443 ntBASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC112698.1-201ENST00000510299 916 ntBASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.28■□□□□ 0.2
CTPS2Q9NRF8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 NKILA-202ENST00000614771 2598 ntBASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 TSPY22P-201ENST00000427496 604 ntBASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 FAM86EP-206ENST00000510506 987 ntBASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 AC011498.5-201ENST00000592027 486 ntBASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 LINC01451-201ENST00000623792 534 ntBASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTPS2Q9NRF8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTPS2Q9NRF8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 KRT18P35-201ENST00000510488 1269 ntBASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms