Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 TNRC18P2-201ENST00000417666 2714 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AL139385.1-201ENST00000611744 3272 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 UNC93B5-201ENST00000530315 699 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC008403.3-201ENST00000598924 454 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC092384.3-202ENST00000564646 2873 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 AC139749.1-202ENST00000617529 3139 ntBASIC20.68■□□□□ 0.9
RTN4Q9NQC3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RTN4Q9NQC3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 AC104640.1-201ENST00000562617 2109 ntBASIC20.67■□□□□ 0.9
RTN4Q9NQC3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTN4Q9NQC3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 MTMR9LP-203ENST00000426597 1545 ntBASIC20.66■□□□□ 0.9
RTN4Q9NQC3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.66■□□□□ 0.9
RTN4Q9NQC3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTN4Q9NQC3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC20.65■□□□□ 0.9
RTN4Q9NQC3 AC004264.1-201ENST00000608354 794 ntBASIC20.65■□□□□ 0.9
RTN4Q9NQC3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms