Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UPF2Q9HAU5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UPF2Q9HAU5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.45■■□□□ 1.03
UPF2Q9HAU5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.45■■□□□ 1.03
UPF2Q9HAU5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 TSPY14P-201ENST00000303979 915 ntBASIC21.45■■□□□ 1.02
UPF2Q9HAU5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AL390955.1-201ENST00000428694 934 ntBASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF2Q9HAU5 AC005915.1-201ENST00000624912 2018 ntBASIC21.45■■□□□ 1.02
UPF2Q9HAU5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 FLJ38576-201ENST00000623820 2459 ntBASIC21.44■■□□□ 1.02
UPF2Q9HAU5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 MIR1238-201ENST00000408483 83 ntBASIC21.44■■□□□ 1.02
UPF2Q9HAU5 EGLN1P1-201ENST00000531623 762 ntBASIC21.44■■□□□ 1.02
UPF2Q9HAU5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 AL157888.1-201ENST00000631930 593 ntBASIC21.44■■□□□ 1.02
UPF2Q9HAU5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF2Q9HAU5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 AP000523.1-201ENST00000398242 1049 ntBASIC21.43■■□□□ 1.02
UPF2Q9HAU5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 MIR4785-201ENST00000585005 73 ntBASIC21.43■■□□□ 1.02
UPF2Q9HAU5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF2Q9HAU5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms