Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
KRTAP9-3Q9BYQ3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC018445.3-201ENST00000624177 1945 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC006511.2-201ENST00000388966 660 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC015922.1-201ENST00000421102 1152 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 NUCKS1P1-201ENST00000452067 703 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 CCDC74BP1-201ENST00000508880 1123 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AP003168.1-201ENST00000530091 307 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 STK25P1-201ENST00000585406 838 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AP001010.1-201ENST00000588397 538 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC007423.1-201ENST00000605009 627 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC020978.9-201ENST00000624380 1141 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC008993.2-201ENST00000631744 806 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC097637.2-201ENST00000624096 1997 ntBASIC8.01□□□□□ -1.13
KRTAP9-3Q9BYQ3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC092919.2-201ENST00000623631 1645 ntBASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 AC005332.7-201ENST00000614046 2005 ntBASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 PHGDH-209ENST00000641074 1780 ntBASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC8□□□□□ -1.13
KRTAP9-3Q9BYQ3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms