Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LCE3DQ9BYE3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 KRT8P50-201ENST00000562022 1438 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AL163051.1-201ENST00000569214 1512 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 DUSP5P2-201ENST00000426873 1033 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 Z85996.1-201ENST00000494644 937 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 DUTP2-201ENST00000519164 463 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AF201337.1-201ENST00000520239 748 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC105036.2-201ENST00000569468 176 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 AC131212.4-201ENST00000623606 975 ntBASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC4.72□□□□□ -1.65
LCE3DQ9BYE3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms