Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 AL024508.2-201ENST00000607749 1894 ntBASIC19.83■□□□□ 0.76
CCDC94Q9BW85 LINC00602-201ENST00000629776 2065 ntBASIC19.83■□□□□ 0.76
CCDC94Q9BW85 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 AC105020.1-201ENST00000435356 2205 ntBASIC19.83■□□□□ 0.76
CCDC94Q9BW85 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 AL136379.1-201ENST00000623471 2642 ntBASIC19.83■□□□□ 0.76
CCDC94Q9BW85 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC94Q9BW85 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 AC113404.2-201ENST00000507884 177 ntBASIC19.82■□□□□ 0.76
CCDC94Q9BW85 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 IGHV3-41-201ENST00000613121 348 ntBASIC19.82■□□□□ 0.76
CCDC94Q9BW85 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 AL023806.1-201ENST00000603994 1649 ntBASIC19.82■□□□□ 0.76
CCDC94Q9BW85 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC94Q9BW85 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 GUSBP12-201ENST00000513727 720 ntBASIC19.81■□□□□ 0.76
CCDC94Q9BW85 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 AC004263.2-201ENST00000617183 678 ntBASIC19.81■□□□□ 0.76
CCDC94Q9BW85 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC94Q9BW85 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC94Q9BW85 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms