Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AC108751.1-201ENST00000490852 363 ntBASIC20.29■□□□□ 0.84
SLF1Q9BQI6 RNA5SP416-201ENST00000516838 111 ntBASIC20.29■□□□□ 0.84
SLF1Q9BQI6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 AL139424.1-201ENST00000607572 797 ntBASIC20.29■□□□□ 0.84
SLF1Q9BQI6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 AC006504.4-201ENST00000592118 1568 ntBASIC20.29■□□□□ 0.84
SLF1Q9BQI6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.29■□□□□ 0.84
SLF1Q9BQI6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 HCG11-201ENST00000411553 5696 ntBASIC20.28■□□□□ 0.84
SLF1Q9BQI6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.28■□□□□ 0.84
SLF1Q9BQI6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 STK19B-204ENST00000512515 211 ntBASIC20.28■□□□□ 0.84
SLF1Q9BQI6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLF1Q9BQI6 FLJ13224-201ENST00000313737 1514 ntBASIC20.27■□□□□ 0.84
SLF1Q9BQI6 KRT18P55-202ENST00000578578 1546 ntBASIC20.27■□□□□ 0.84
SLF1Q9BQI6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 AC002558.1-201ENST00000488906 803 ntBASIC20.27■□□□□ 0.84
SLF1Q9BQI6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.27■□□□□ 0.84
SLF1Q9BQI6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SLF1Q9BQI6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SLF1Q9BQI6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SLF1Q9BQI6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 AC040169.1-201ENST00000565382 521 ntBASIC20.26■□□□□ 0.83
SLF1Q9BQI6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 AC008764.6-201ENST00000595909 2069 ntBASIC20.26■□□□□ 0.83
SLF1Q9BQI6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLF1Q9BQI6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms