Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE1Q99829 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CPNE1Q99829 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 SPDYE13P-201ENST00000445314 798 ntBASIC17.47■□□□□ 0.39
CPNE1Q99829 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE1Q99829 GUSBP12-201ENST00000513727 720 ntBASIC17.47■□□□□ 0.39
CPNE1Q99829 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CPNE1Q99829 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPNE1Q99829 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 AL118508.1-201ENST00000613502 2345 ntBASIC17.47■□□□□ 0.39
CPNE1Q99829 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE1Q99829 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE1Q99829 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPNE1Q99829 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE1Q99829 AGGF1P2-201ENST00000426656 2106 ntBASIC17.46■□□□□ 0.39
CPNE1Q99829 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPNE1Q99829 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE1Q99829 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 AC109462.3-201ENST00000573934 613 ntBASIC17.46■□□□□ 0.39
CPNE1Q99829 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 AC083849.1-201ENST00000615227 514 ntBASIC17.46■□□□□ 0.39
CPNE1Q99829 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE1Q99829 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE1Q99829 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE1Q99829 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.38
CPNE1Q99829 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE1Q99829 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE1Q99829 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.38
CPNE1Q99829 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CPNE1Q99829 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE1Q99829 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CPNE1Q99829 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE1Q99829 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CPNE1Q99829 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE1Q99829 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 OR6D1P-203ENST00000641209 4860 ntBASIC17.45■□□□□ 0.38
CPNE1Q99829 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE1Q99829 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
CPNE1Q99829 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.45■□□□□ 0.38
CPNE1Q99829 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.45■□□□□ 0.38
CPNE1Q99829 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPNE1Q99829 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE1Q99829 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 AC105020.1-201ENST00000435356 2205 ntBASIC17.44■□□□□ 0.38
CPNE1Q99829 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.44■□□□□ 0.38
CPNE1Q99829 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPNE1Q99829 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.44■□□□□ 0.38
CPNE1Q99829 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms