Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD9AQ99638 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD9AQ99638 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD9AQ99638 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.53■□□□□ 0.56
RAD9AQ99638 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.53■□□□□ 0.56
RAD9AQ99638 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD9AQ99638 RN7SL204P-201ENST00000582831 262 ntBASIC18.53■□□□□ 0.56
RAD9AQ99638 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.53■□□□□ 0.56
RAD9AQ99638 AC093677.2-201ENST00000600169 1863 ntBASIC18.53■□□□□ 0.56
RAD9AQ99638 AC012645.4-201ENST00000610691 1061 ntBASIC18.53■□□□□ 0.56
RAD9AQ99638 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAD9AQ99638 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD9AQ99638 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD9AQ99638 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD9AQ99638 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAD9AQ99638 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD9AQ99638 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAD9AQ99638 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 FAM58DP-201ENST00000428076 619 ntBASIC18.52■□□□□ 0.56
RAD9AQ99638 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD9AQ99638 KLF2P3-201ENST00000451977 1087 ntBASIC18.52■□□□□ 0.56
RAD9AQ99638 AC087163.2-201ENST00000457299 853 ntBASIC18.52■□□□□ 0.56
RAD9AQ99638 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
RAD9AQ99638 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.52■□□□□ 0.56
RAD9AQ99638 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.52■□□□□ 0.56
RAD9AQ99638 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 AC243562.1-201ENST00000560672 389 ntBASIC18.52■□□□□ 0.56
RAD9AQ99638 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD9AQ99638 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD9AQ99638 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RAD9AQ99638 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAD9AQ99638 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
RAD9AQ99638 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC120498.9-201ENST00000339021 3867 ntBASIC18.51■□□□□ 0.55
RAD9AQ99638 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.51■□□□□ 0.55
RAD9AQ99638 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAD9AQ99638 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC005225.4-201ENST00000557330 545 ntBASIC18.51■□□□□ 0.55
RAD9AQ99638 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD9AQ99638 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD9AQ99638 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD9AQ99638 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD9AQ99638 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD9AQ99638 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD9AQ99638 TNXA-203ENST00000507684 2038 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms