Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.27□□□□□ -0.29
AP1S3Q96PC3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 AL645608.8-201ENST00000606034 2086 ntBASIC13.26□□□□□ -0.29
AP1S3Q96PC3 AC110285.5-201ENST00000611501 352 ntBASIC13.26□□□□□ -0.29
AP1S3Q96PC3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP1S3Q96PC3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 KRT8P50-201ENST00000562022 1438 ntBASIC13.25□□□□□ -0.29
AP1S3Q96PC3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 AL136379.1-201ENST00000623471 2642 ntBASIC13.25□□□□□ -0.29
AP1S3Q96PC3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 AC124016.1-201ENST00000609552 612 ntBASIC13.25□□□□□ -0.29
AP1S3Q96PC3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
AP1S3Q96PC3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms