Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN4Q96NY8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 AC140658.5-201ENST00000438532 169 ntBASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 AL592309.1-201ENST00000443127 649 ntBASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 AL096828.2-201ENST00000567259 1965 ntBASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN4Q96NY8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 KRT18P32-201ENST00000424695 1287 ntBASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AC099522.2-201ENST00000607001 744 ntBASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AC012645.4-201ENST00000610691 1061 ntBASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AP001059.3-201ENST00000619053 235 ntBASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 AC100803.2-201ENST00000562459 1963 ntBASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN4Q96NY8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms