Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 NUS1P2-201ENST00000417358 873 ntBASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 POM121L3P-201ENST00000419331 1163 ntBASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 AC138894.3-201ENST00000603787 634 ntBASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 AL139327.4-201ENST00000612362 153 ntBASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 LYSMD4-203ENST00000378904 2122 ntBASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDK5RAP3Q96JB5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 RCN1P2-201ENST00000398357 915 ntBASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 AC114341.1-201ENST00000618070 349 ntBASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 PP12613-201ENST00000424958 2230 ntBASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDK5RAP3Q96JB5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 MIR3652-201ENST00000579335 131 ntBASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 AC141586.5-201ENST00000624546 2050 ntBASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.7■□□□□ 0.74
CDK5RAP3Q96JB5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 INTS4P1-201ENST00000438455 1935 ntBASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDK5RAP3Q96JB5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms