Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 AC006538.3-201ENST00000612495 578 ntBASIC18.43■□□□□ 0.54
ATP2A3Q93084 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A3Q93084 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 AL356309.3-201ENST00000624132 1934 ntBASIC18.43■□□□□ 0.54
ATP2A3Q93084 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A3Q93084 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 FAM220CP-201ENST00000395253 831 ntBASIC18.42■□□□□ 0.54
ATP2A3Q93084 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 AL049840.3-201ENST00000602669 611 ntBASIC18.42■□□□□ 0.54
ATP2A3Q93084 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 FLJ13224-201ENST00000313737 1514 ntBASIC18.42■□□□□ 0.54
ATP2A3Q93084 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A3Q93084 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A3Q93084 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 PHGDH-209ENST00000641074 1780 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 HNRNPDP1-201ENST00000439535 754 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 SART3-203ENST00000546611 1184 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 AC106730.1-201ENST00000566722 1090 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 AL139288.1-201ENST00000623748 933 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 AC132938.6-201ENST00000623828 1655 ntBASIC18.41■□□□□ 0.54
ATP2A3Q93084 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A3Q93084 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ATP2A3Q93084 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2A3Q93084 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2A3Q93084 RPL13AP23-201ENST00000480739 586 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms