Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AL138688.1-201ENST00000624851 1594 ntBASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.5■□□□□ 0.55
UBA3Q8TBC4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 CROCCP2-202ENST00000412962 2773 ntBASIC18.49■□□□□ 0.55
UBA3Q8TBC4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 AC003669.1-201ENST00000334569 611 ntBASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 AL691432.3-201ENST00000621860 400 ntBASIC18.49■□□□□ 0.55
UBA3Q8TBC4 AL355877.3-201ENST00000622820 899 ntBASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBA3Q8TBC4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 AC009336.1-201ENST00000608941 1553 ntBASIC18.48■□□□□ 0.55
UBA3Q8TBC4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 FGFR3P6-201ENST00000457012 610 ntBASIC18.48■□□□□ 0.55
UBA3Q8TBC4 BX005266.1-201ENST00000473402 457 ntBASIC18.48■□□□□ 0.55
UBA3Q8TBC4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 NKAPP1-205ENST00000585790 367 ntBASIC18.48■□□□□ 0.55
UBA3Q8TBC4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 AC046185.3-201ENST00000623228 1824 ntBASIC18.48■□□□□ 0.55
UBA3Q8TBC4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.48■□□□□ 0.55
UBA3Q8TBC4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.47■□□□□ 0.55
UBA3Q8TBC4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 SPDYE21P-201ENST00000413323 827 ntBASIC18.47■□□□□ 0.55
UBA3Q8TBC4 RBM17P3-201ENST00000417687 1192 ntBASIC18.47■□□□□ 0.55
UBA3Q8TBC4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
UBA3Q8TBC4 AC079776.2-201ENST00000641154 1609 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms