Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.4■■□□□ 1.02
RTL9Q8NET4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTL9Q8NET4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.39■■□□□ 1.02
RTL9Q8NET4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
RTL9Q8NET4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTL9Q8NET4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RTL9Q8NET4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.39■■□□□ 1.02
RTL9Q8NET4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
RTL9Q8NET4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTL9Q8NET4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 AC135050.7-201ENST00000624508 2218 ntBASIC21.39■■□□□ 1.01
RTL9Q8NET4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTL9Q8NET4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 CXCL1P1-201ENST00000502804 216 ntBASIC21.38■■□□□ 1.01
RTL9Q8NET4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 SNHG9-202ENST00000564014 471 ntBASIC21.38■■□□□ 1.01
RTL9Q8NET4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.38■■□□□ 1.01
RTL9Q8NET4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTL9Q8NET4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 AC087163.2-201ENST00000457299 853 ntBASIC21.37■■□□□ 1.01
RTL9Q8NET4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.37■■□□□ 1.01
RTL9Q8NET4 ACTL9-202ENST00000612068 1252 ntBASIC21.37■■□□□ 1.01
RTL9Q8NET4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 ELL2P1-201ENST00000413990 1906 ntBASIC21.37■■□□□ 1.01
RTL9Q8NET4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.37■■□□□ 1.01
RTL9Q8NET4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
RTL9Q8NET4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 BCAR1-209ENST00000546196 1340 ntBASIC21.37■■□□□ 1.01
RTL9Q8NET4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.37■■□□□ 1.01
RTL9Q8NET4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RTL9Q8NET4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 FAM185BP-201ENST00000443595 716 ntBASIC21.36■■□□□ 1.01
RTL9Q8NET4 SLC25A6P2-201ENST00000497974 877 ntBASIC21.36■■□□□ 1.01
RTL9Q8NET4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 CNN2P11-201ENST00000429351 262 ntBASIC21.36■■□□□ 1.01
RTL9Q8NET4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RTL9Q8NET4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.36■■□□□ 1.01
RTL9Q8NET4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms