Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
FAM43AQ8N2R8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ANO7L1-203ENST00000602586 1720 ntBASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 MIR5100-201ENST00000579544 119 ntBASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 KRT8P32-201ENST00000512863 1461 ntBASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.44■■□□□ 1.02
FAM43AQ8N2R8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 MIR7706-201ENST00000613747 67 ntBASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 PCDHB19P-201ENST00000570871 2371 ntBASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FAM43AQ8N2R8 AC092850.2-201ENST00000623821 2697 ntBASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 PMS2P7-201ENST00000506558 1336 ntBASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.42■■□□□ 1.02
FAM43AQ8N2R8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms