Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 AL353692.3-201ENST00000407031 1396 ntBASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC170Q8IYT3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 AC092053.1-201ENST00000605787 1936 ntBASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC170Q8IYT3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 AL603756.1-201ENST00000606511 2163 ntBASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC170Q8IYT3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC170Q8IYT3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 STARP1-201ENST00000397973 869 ntBASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 AP003733.1-201ENST00000491725 852 ntBASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 AC124947.2-201ENST00000547118 1133 ntBASIC18.76■□□□□ 0.59
CCDC170Q8IYT3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms