Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.37■□□□□ 0.05
LYSMD2Q8IV50 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AC004951.3-201ENST00000418645 1148 ntBASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 UNC93B5-201ENST00000530315 699 ntBASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LYSMD2Q8IV50 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC008040.2-201ENST00000461049 708 ntBASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AC034236.2-201ENST00000606662 1610 ntBASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD2Q8IV50 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms