Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 TUBB3P1-201ENST00000405796 1332 ntBASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR3Q6P9H4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 MIR4515-201ENST00000584082 81 ntBASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 AF228730.6-201ENST00000641497 218 ntBASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 AC084121.3-201ENST00000641716 218 ntBASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 AC105233.6-201ENST00000642093 218 ntBASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNKSR3Q6P9H4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 MIR943-201ENST00000401286 94 ntBASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 KLF2P3-201ENST00000451977 1087 ntBASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 AL139327.4-201ENST00000612362 153 ntBASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 AL161645.1-201ENST00000622716 1255 ntBASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNKSR3Q6P9H4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 FLJ13224-201ENST00000313737 1514 ntBASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 AC015922.1-201ENST00000421102 1152 ntBASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 GPS2P2-201ENST00000430745 888 ntBASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 DUX4L17-201ENST00000557360 1267 ntBASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms